[CLEANING] Libraries archive
to do: cleaning of git folders
rm: missing operand
Try 'rm --help' for more information.
	[CLEANING] bin(s)
	[CLEANING qe_pseudo slatec math77 local] Extension(s): \.f90 \.o \.lock \.mk \.mod \.save \.tmp_source to_save
	[CLEANING qe_pseudo slatec math77 local] Libraries
	[CLEANING qe_pseudo slatec math77 local] Modules
	[CLEANING external-libraries] yaml futile iotk hdf5 netcdf netcdff etsf_io libxc lapack scalapack elpa magma petsc slepc fftw fftqe ldiago devxlib
	[CLEANING external-libraries] bin(s) and include(s)
	[CLEANING yaml futile iotk hdf5 netcdf netcdff etsf_io libxc lapack scalapack elpa magma petsc slepc fftw fftqe ldiago devxlib] Extension(s): Makefile .stamp
	[CLEANING] Stamps
	[CLEANING driver] Extension(s): \.f90 \.o \.lock \.mk \.mod \.save \.tmp_source to_save
	[CLEANING] Stamped Libraries
	[CLEANING src] Extension(s): \.f90 \.o \.lock \.mk \.mod \.save \.tmp_source to_save
	[CLEANING src] Libraries
	[CLEANING src] Modules
	[CLEANING ypp] Extension(s): \.f90 \.o \.lock \.mk \.mod \.save \.tmp_source to_save
	[CLEANING ypp] Libraries
	[CLEANING ypp] Modules
	[CLEANING interfaces] Extension(s): \.f90 \.o \.lock \.mk \.mod \.save \.tmp_source to_save
	[CLEANING interfaces] Libraries
	[CLEANING interfaces] Modules
	[CLEANING] Configure, Make-related files and lists
	[CLEANING] Dependencies
	[CLEANING] log
./conf_local.sh: 1: module: not found
checking for vim... vim
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for malloc.h... yes
checking for struct mallinfo.arena... yes
checking for git... yes
checking for malloc.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for string.h... (cached) yes
checking for sys/time.h... yes
checking for size_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for GNU libc compatible malloc... yes
checking for GNU libc compatible realloc... yes
checking whether lstat correctly handles trailing slash... yes
checking whether stat accepts an empty string... no
checking whether make sets $(MAKE)... yes
checking for the size of a pointer... 8 bytes
checking for gcc... (cached) gcc
checking whether the compiler supports GNU C... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to enable C11 features... (cached) none needed
checking for GNU make... make
checking for ar... ar
checking whether the compiler supports GNU Fortran... yes
checking whether gfortran accepts -g... yes
checking if the current OS is supported... yes
configure: WIDESETUP: using build_os="linux"
configure: WIDESETUP: using F90SUFFIX=".f90"
configure: WIDESETUP: using AR="ar"
configure: WIDESETUP: using AR_FLAGS="-r"
checking for Fortran flag to compile .f90 files... none
checking for gfortran kind and version... gfortran GNU Fortran (GCC) 15.2.0 unknown
checking for specific gfortran flags... (User-defined) -O3  -mtune=native -Wall -fcheck=bounds
checking for specific Open-MP flags... -fopenmp
checking for specific gcc flags... -O2
checking for specific unoptimized flags... -O0 -g -mtune=native
checking for specific NETCDF flags... -DgFortran
checking how to get verbose linking output from gfortran... -v
checking for Fortran libraries of gfortran...  -L/opt/gcc/15.2.0/lib64/../lib64 -L/opt/gcc/15.2.0/lib/gcc/x86_64-pc-linux-gnu/15.2.0 -L/opt/gcc/15.2.0/lib/gcc/x86_64-pc-linux-gnu/15.2.0/../../../../lib64 -L/lib/x86_64-linux-gnu -L/lib/../lib64 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib64 -L/opt/gcc/15.2.0/libxc-7.0.0/lib -L/opt/gcc/15.2.0/fftw-3.3.10/lib -L/opt/gcc/15.2.0/scalapack-2.2.2/lib -L/opt/gcc/15.2.0/OpenBLAS-0.3.28/lib -L/opt/gcc/15.2.0/lib64 -L/opt/gcc/15.2.0/lib/gcc/x86_64-pc-linux-gnu/15.2.0/../../.. -L/lib -L/usr/lib -lgfortran -lm -lquadmath
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
checking for external C routine (test) naming scheme... test_
checking for Fortran flag needed to accept free-form source... none
checking fortran 90 modules inclusion flag... -I
checking how to run the C preprocessor... gcc -E
configure: testing C-preprocessor gcc -E -P
checking if C precompiler works on C source... yes
configure: testing FC-preprocessor gfortran -E -P -cpp
checking if FC precompiler works on FC source... yes
checking whether the compiler supports GNU Fortran 77... yes
checking whether gfortran accepts -g... yes
checking if Fortran 77 compiler gfortran works... yes
checking for mpifort... no
checking for mpifort... mpifort
checking for a working mpif.h... yes
checking for mpif77... no
checking for mpif77... mpif77
checking for mpicc... no
checking for mpicc... mpicc
checking for a working mpi.h... yes
checking for MPI version... Open MPI v5.0.6, package: Open MPI filippon@amore Distribution, ident: 5.0.6, repo rev: v5.0.6, Nov 15, 2024
checking for /opt/gcc/15.2.0/openmpi-5.0.6/include/mpif.h... yes
checking how to get verbose linking output from mpif77... -v
checking for Fortran 77 libraries of mpif77...  -L/opt/gcc/15.2.0/openmpi-5.0.6/lib -L/opt/gcc/15.2.0/lib64/../lib64 -L/opt/gcc/15.2.0/lib/gcc/x86_64-pc-linux-gnu/15.2.0 -L/opt/gcc/15.2.0/lib/gcc/x86_64-pc-linux-gnu/15.2.0/../../../../lib64 -L/lib/x86_64-linux-gnu -L/lib/../lib64 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib64 -L/opt/gcc/15.2.0/libxc-7.0.0/lib -L/opt/gcc/15.2.0/fftw-3.3.10/lib -L/opt/gcc/15.2.0/scalapack-2.2.2/lib -L/opt/gcc/15.2.0/OpenBLAS-0.3.28/lib -L/opt/gcc/15.2.0/lib64 -L/opt/gcc/15.2.0/lib/gcc/x86_64-pc-linux-gnu/15.2.0/../../.. -L/lib -L/usr/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath
checking for caxpy... no
checking for ATL_xerbla in -latlas... no
checking for caxpy in -lblas... yes
checking for daxpy in -ldaxpy... no
checking for caxpy in -lcxml... no
checking for caxpy in -ldxml... no
checking for caxpy in -lscs... no
checking for caxpy in -lcomplib.sgimath... no
checking for caxpy in -lblas... (cached) yes
checking for caxpy in -lessl... no
checking for caxpy in -lblas... (cached) yes
configure: Blas found in -lblas but imposing built-in library
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for cheev... no
checking for cheev in -llapack... no
checking for cheev in -llapack_rs6k... no
configure: Could not find lapack. Using the built-in library
checking for FFT... checking for FFT... Internal FFTW3
checking for dlopen in -ldl... yes
checking for main in -lstdc++... yes
checking for internal Petsc library... static found, despite dynamic lapack.
You may delete the static petsc and re-run the configure to get smaller executables
checking for internal Slepc library... static found, despite dynamic lapack.
You may delete the static slepc and re-run the configure to get smaller executables
checking for deflate in -lz ... yes
checking for deflate in -lsz... no
checking for dlopen in -ldl... (cached) yes
checking for curl_version in -lcurl... no
checking for cos in -lm... yes
checking for HDF5... no
checking for HDF5 using h5pfc/h5fc system compilers... no
checking for HDF5 using automatic library list... no
checking for internal HDF5 library... already compiled
checking for internal NETCDF library... already compiled
checking for YAML library... no
checking for FUTILE library... no
checking for internal IOTK library... already compiled
checking for ETSF_IO Library... no
checking for libxc... Compatible external LibXC not found/specified. Found internal already compiled.
checking for devxlib... Compatible external DevXlib not found/specified. Found internal already compiled.
configure: creating ./config.status
config.status: creating lib/ldiago/make_ldiago.inc
config.status: creating config/setup
config.status: creating config/mk/global/defs.mk
config.status: creating config/report
config.status: creating config/msg_ydb
config.status: creating src/wf_and_fft/sgfft.F
config.status: creating src/tools/.objects
config.status: creating config/mk/local/defs.mk
config.status: creating config/mk/defs.mk
config.status: creating sbin/compilation/helper.inc.sh
config.status: creating include/branch.inc
config.status: creating include/driver/editor.h
config.status: creating lib/archive/git.list
config.status: creating include/headers/common/have_malloc.h
#
# Yambo Fork: Lumen 2.0.0
#
# Legend: [E]=external library [C]=internal lib to be compiled [I]=internal lib already compiled [X]=used [-]=not used
# 
# - GENERAL CONFIGURATIONS -
# 
# [SYS] linux@x86_64
# [SRC] /data/sangalli/lumen/gpl-repo/fixes/cutoff
# [BRN] fix-cutoff
# [CMP] /data/sangalli/lumen/test-suite/fixes/cutoff/compile_dir/perl-suite/fix-cutoff/gfortran15.2_openmpi5.0_SP.sh
# [TGT] /data/sangalli/lumen/test-suite/fixes/cutoff/compile_dir/perl-suite/fix-cutoff/gfortran15.2_openmpi5.0_SP.sh
# [BIN] /data/sangalli/lumen/test-suite/fixes/cutoff/compile_dir/perl-suite/fix-cutoff/gfortran15.2_openmpi5.0_SP.sh/bin
# [LIB] /data/sangalli/local-libs/default/gfortran/mpifort
#
# [EDITOR] vim
# [ MAKE ] make
#
# [-] Gamma-only version of the code
# [-] Double precision
# [X] Keep object files
# [X] Run-Time timing profile 
# [-] Run-Time memory profile 
#
# - SCRIPTS -
#
# [-] YDB: Yambo DataBase
# [-] YAMBOpy: Yambo Python scripts
# 
# - PARALLEL/GPU SUPPORT -
#
# [-] GPU support ( no_gpu )
# [E] MPI
# [X] OpenMP
# 
# - I/O -
#
# [X]: Parallel I/O (via HDF5)
# [I]: HDF5 Parallel_lib
# [I]: NETCDF Large Files Support enabled, Version 4
# 
# - LIBRARIES - 
# 
# > I/O: NETCDF Large Files Support enabled, Version 4, HDF5 Parallel_lib
#
# [I] IOTK      : -L(LIB)/lib -liotk (QE hdf5-support)
#                 -I(LIB)/include/
# [-] ETSF_IO   : 
#                 
# [I] NETCDFF   : -L(LIB)/v4/parallel/lib/ -lnetcdff
#                 -I(LIB)/v4/parallel/include
# [I] NETCDF    : -L(LIB)/v4/parallel/lib/ -lnetcdf
#                 -I(LIB)/v4/parallel/include
# [I] HDF5      : -L(LIB)/v4/parallel/lib/ -lhdf5_hl_fortran -lhdf5_fortran -L(LIB)/v4/parallel/lib/ -lhdf5_hl -lhdf5 -lm -ldl -lz
#                 -I(LIB)/v4/parallel/include
#
# > MATH: (Internal FFTW3) 
#
# [I] BLAS      : (LIB)/lib/libblas.a (for petsc: (LIB)/lib/libblas.so)
# [I] LAPACK    : (LIB)/lib/liblapack.a (for petsc: (LIB)/lib/liblapack.so)
# [I] SCALAPACK : (LIB)/lib/libscalapack.a 
# [I] ELPA      : (LIB)/no_gpu/lib/libelpa_openmp.a 
#                 -I(LIB)/no_gpu/include/
# [I] FFT       : (LIB)/lib/libfftw3.a
#                 -I(LIB)/include/
# [I] PETSC     : (LIB)/single/lib/libpetsc.a -ldl -lstdc++ 
#                 -I(LIB)/single/include 
# [I] SLEPC     : (LIB)/single/lib/libslepc.a 
#                 -I(LIB)/single/include 
# [-] MAGMA     : 
#                  (fortran modules to be compiled: no) 
#
# > OTHERs: 
#
# [I] Ldiago    : (LIB)/diago/no_gpu/lib/libldiago.a
#                 -I(LIB)/diago/no_gpu/include/
# [I] LibXC     : -L(LIB)/lib/ -lxcf90 -lxcf03 -lxc
#                 -I(LIB)/include
# [I] DevXlib   : -L(LIB)/no_gpu/lib -ldevXlib
#                 -I(LIB)/no_gpu/include
# [-] LibCUDA   :    
#                 
# [E] MPI       : -L/opt/gcc/15.2.0/openmpi-5.0.6/lib -Wl,-rpath -Wl,/opt/gcc/15.2.0/openmpi-5.0.6/lib -Wl,--enable-new-dtags -lmpi 
#                 -I/opt/gcc/15.2.0/openmpi-5.0.6/include 
#
# - COMPILERS -
#
# FC kind = gfortran GNU Fortran (GCC) 15.2.0
# MPI kind= Open MPI v5.0.6, package: Open MPI filippon@amore Distribution, ident: 5.0.6, repo rev: v5.0.6, Nov 15, 2024
#
# [ CPP ] gcc -E -P -D_HDF5_LIB -D_HDF5_IO -D_PAR_IO -D_MPI -D_FFTW -D_SLEPC -D_SCALAPACK -D_ELPA -D_ELPA_OMP    -D_OPENMP -D_TIMING      -D_P2Y_QEXSD_HDF5
# [ FPP ] gfortran -E -P -cpp -D_HDF5_LIB -D_HDF5_IO -D_PAR_IO -D_MPI -D_FFTW -D_SLEPC -D_SCALAPACK -D_ELPA -D_ELPA_OMP    -D_OPENMP -D_TIMING     
# [ CC  ] mpicc -O2 -D_C_US -D_FORTRAN_US
# [ FC  ] mpifort -O3  -mtune=native -Wall -fcheck=bounds  -fopenmp 
# [ FCUF] -O0 -g -mtune=native 
# [ F77 ] mpif77 -O3  -mtune=native -Wall -fcheck=bounds 
# [ F77U] -O0 -g -mtune=native 
# [Cmain] 
#
# You can modify compilers and flags by editing the file "config/setup"
#